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Gene Validator v1.6.2

Identify Problems with Gene Predictions





8
ENA|AAY44234|AAY44234.1 Corallus caninus partial brain-derived neurotrophic factor 112 192 [236, 253] 10% (too short) 0.0 1.0 112 HSPs align in frame 1 100% (frame 1) 89% conserved; 0% extra; 14% missing.
5
ENA|ACR78454|ACR78454.1 Heliothis virescens (tobacco budworm) attacin 10 208 [208, 254] 10% (too short) -0.1 1.0 10 HSPs align in frame 1 100% (frame 1) 100% conserved; 0% extra; 15% missing.
2
ENA|AEO89880|AEO89880.1 Homo sapiens (human) NADH dehydrogenase subunit 4L 291 99 [98, 99] 100% 0.0 1.0 291 HSPs align in frame 1 99% (frame 1) 91% conserved; 1% extra; 0% missing.
3
ENA|AAZ66996|AAZ66996.1 Erymnochelys madagascariensis partial brain-derived neurotrophic factor 118 239 [236, 253] 40% 0.0 1.0 118 HSPs align in frame 1 100% (frame 1) 97% conserved; 0% extra; 3% missing.
4
ENA|AAY44250|AAY44250.1 Ramphotyphlops sp. YPM 13663 partial brain-derived neurotrophic factor 117 223 [236, 253] 22% 0.0 1.0 117 HSPs align in frame 2 100% (frame 2) 13% conserved; 18% extra; 19% missing.
7
ENA|AAT08493|AAT08493.1 Rhineura floridana cytochrome c oxidase subunit II 323 228 [227, 228] 34% 0.0 1.0 323 HSPs align in frame 1 51% (frame 1) 84% conserved; 0% extra; 1% missing.
1
ENA|AAC06291|AAC06291.1 Arabidopsis thaliana (thale cress) syntaxin of plants 31 10 337 [336, 355] 20% 0.0 1.0 10 HSPs align in frame 1 100% (frame 1) 100% conserved; 4% extra; 11% missing.
10
ENA|AEV14992|AEV14992.1 Xenopipo atronitens (black manakin) partial cytochrome oxidase subunit 1 229 217 [505, 541] 3% (too short) 0.0 1.0 229 HSPs align in frame 2 45% (frame -2) 14% conserved; 6% extra; 60% missing.
6
ENA|EEF42972|EEF42972.1 Ricinus communis (castor bean) calmodulin-binding transcription activator (camta), plants, putative 24 1020 [724, 1208] 42% -0.3 0.13 33 HSPs align in frame 1; 7 HSPs align in frame 3 100% (frame 1) 100% conserved; 3% extra; 13% missing.
9
ENA|CAC41167|CAC41167.1 Spodoptera frugiperda (fall armyworm) hypothetical protein 131 1735 [734, 1007] 27% -0.4 0.03 320 HSPs align in frame 1 100% (frame 1) 66% conserved; 1% extra; 44% missing.